At a glance
This section displays a description of the variant calls made by Sniffles.
Number of Insertions
96
Number of Deletions
78
Other SV types
1
Chromosomes with SVs
23
Other SV types are: inversions, duplications and translocations.
Variant calling results
This section displays summary statistics of the variant calls made by Sniffles.
| index | BND | DEL | INS |
|---|---|---|---|
| Count | 1.0 | 78.0 | 96.0 |
| Min. Length | 0.0 | 30.0 | 30.0 |
| Ave. Length | 0.0 | 78.5 | 101.0 |
| Max. Length | 0.0 | 1810.0 | 2785.0 |
Karyogram
Chromosomal hotspots of structural variation.
Red: Insertion
Blue: Deletion
Size distribution
This section shows the size distributions of SV calls per type. Deletions have negative values.
The plot shows Indels with |length| < 5Kb.
Results evaluation
This report was generated without evaluation results. To see them, re-run the workflow with --sv_benchmark set.